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结合虚拟单像素成像解卷积的双边照明光片荧光显微技术

胡金虎 林丹樱 张炜 张晨爽 屈军乐 于斌

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结合虚拟单像素成像解卷积的双边照明光片荧光显微技术

胡金虎, 林丹樱, 张炜, 张晨爽, 屈军乐, 于斌

Dual-sided illumination light-sheet fluorescence microscopy with virtual single-pixel imaging deconvolution

Hu Jin-Hu, Lin Dan-Ying, Zhang Wei, Zhang Chen-Shuang, Qu Jun-Le, Yu Bin
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  • 光片荧光显微术(light-sheet fluorescence microscopy, LSFM)采用薄片光束从侧面激发样品, 在垂直于光片方向上进行成像, 具有成像速度快、光学层析能力强以及光漂白和光毒性低等优点, 适用于对较大活体生物样品进行高质量、长时间三维动态观测. 然而, 传统高斯光束LSFM存在分辨率低和成像视场小的问题. 本文在双边照明LSFM的基础上, 结合虚拟单像素成像解卷积技术, 提出了一种大视场高分辨双边照明LSFM, 实现了视场和分辨率的同时提升. 设计和搭建了双边照明LSFM, 开展了荧光珠和转基因斑马鱼样品的三维光切片显微成像实验, 实验结果证明了系统的三维高分辨成像能力, 对于大视场、高分辨LSFM的发展和应用具有重要意义.
    In light-sheet fluorescence microscopy (LSFM) a thin light sheet is used to excite the specimen from the side and imaging is performed in the direction perpendicular to the light-sheet. It has the advantages of fast imaging speed, high optical sectioning capability and low photobleaching and phototoxicity to samples. Therefore, it is suitable for high-quality, long-term three-dimensional dynamic observation of large living biological samples. However, the traditional Gaussian light sheet illumination microscopy technology has the problems of small imaging field of view and low spatial resolution. Based on the existing dual-sided illumination LSFM, a large field of view and high resolution LSFM combined with virtual single-pixel imaging deconvolution is presented in this paper, which improves the field of view and resolution of LSFM simultaneously. The relevant microscope is designed and built, and three-dimensional optical sectioning imaging experiments on fluorescent beads and transgenic zebrafish standard samples are carried out. The experimental results prove the three-dimensional high resolution imaging capability of the microscope, which is of great significance in developing the large field of view and high resolution LSFM.
      通信作者: 林丹樱, dylin@szu.edu.cn ; 于斌, yubin@szu.edu.cn
    • 基金项目: 国家自然科学基金 (批准号: 61975131, 61775144, 61835009)和深圳市基础研究项目(批准号: JCYJ20200109105411133, JCYJ20170412105003520, JCYJ20180305125649693)资助的课题.
      Corresponding author: Lin Dan-Ying, dylin@szu.edu.cn ; Yu Bin, yubin@szu.edu.cn
    • Funds: Project supported by the National Natural Science Foundation of China (Grant Nos. 61975131, 61775144, 61835009) and the Basic Research Project of Shenzhen, China (Grant Nos. JCYJ20200109105411133, JCYJ20170412105003520, JCYJ20180305125649693).
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    Power R M, Huisken J 2017 Nat. Methods 14 360Google Scholar

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    Royer L A, Lemon W C, Chhetri R K, Wan Y N, Coleman M, Myers E W, Keller P J 2016 Nat. Biotechnol. 34 1267Google Scholar

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    Voie A H, Burns D H, Spelman F A 1993 J. Microsc-Oxford 170 229Google Scholar

    [4]

    Huisken J, Swoger J, Del Bene F, Wittbrodt J, Stelzer E H K 2004 Science 305 1007Google Scholar

    [5]

    Swoger J, Huisken J, Stelzer E H K 2003 Opt. Lett. 28 1654Google Scholar

    [6]

    Krzic U, Gunther S, Saunders T E, Streichan S J, Hufnagel L 2012 Nat. Methods 9 730Google Scholar

    [7]

    Keller P J, Schmidt A D, Wittbrodt J, Stelzer E H K 2008 Science 322 1065Google Scholar

    [8]

    Truong T V, Supatto W, Koos D S, Choi J M, Fraser S E 2011 Nat. Methods 8 757Google Scholar

    [9]

    Liu S, Nie J, Li Y S, Yu T T, Zhu D, Fei P 2017 J. Innovative Opt. Health. Sci. 10 1743006Google Scholar

    [10]

    Planchon T A, Gao L, Milkie D E, Davidson M W, Galbraith J A, Galbraith C G, Betzig E 2011 Nat. Methods 8 417Google Scholar

    [11]

    Gao L, Shao L, Chen B C, Betzig E 2014 Nat. Protoc. 9 1083Google Scholar

    [12]

    Vettenburg T, Dalgarno H I C, Nylk J, Coll-Lladό C, Ferrier D E K, Čižmár T, Gunn-Moore F J, Dholakia K 2014 Nat. Methods 11 541Google Scholar

    [13]

    Yang Z Y, Prokopas M, Nylk J, Coll-Lladό C, Gunn-Moore F J, Ferrier D E K, Vettenburg T, Dholakia K 2014 Biomed. Opt. Express 5 3434Google Scholar

    [14]

    Jia H, Yu X H, Yang Y L, Zhou X, Yan S H, Liu C, Lei M, Yao B L 2019 J. Biophotonics 12 e201800094Google Scholar

    [15]

    Gao L 2015 Opt. Express 23 6102Google Scholar

    [16]

    Westphal V, Rizzoli S O, Lauterbach M A, Kamin D, Jahn R, Hell S W 2008 Science 320 246Google Scholar

    [17]

    Li D, Shao L, Chen B C, Zhang X, Zhang M S, Moses B, Milkie D E, Beach J R, Hammer J A, Pasham M, Kirchhausen T, Baird M A, Davidson M W, Xu P Y, Betzig E 2015 Science 349 aab3500Google Scholar

    [18]

    Betzig E, Patterson G H, Sougrat R, Lindwasser O W, Olenych S, Bonifacino J S, Davidson M W, Lippincott-Schwartz J, Hess H F 2006 Science 313 1642Google Scholar

    [19]

    Rust M J, Bates M, Zhuang X W 2006 Nat. Methods 3 793Google Scholar

    [20]

    Dertinger T, Colyer R, Iyer G, Weiss S, Enderlein J 2009 Proc. Natl. Acad. Sci. U. S. A. 106 22287Google Scholar

    [21]

    Zanacchi F C, Lavagnino Z, Donnorso M P, Del Bue A, Furia L, Faretta M, Diaspro A 2011 Nat. Methods 8 1047Google Scholar

    [22]

    Liu Z, Lavis L D, Betzig E 2015 Mol. Cell 58 644Google Scholar

    [23]

    Legant W R, Shao L, Grimm J B, Brown T A, Milkie D E, Avants B B, Lavis L D, Betzig E 2016 Nat. Methods 13 359Google Scholar

    [24]

    Chen B C, Legant W R, Wang K, Shao L, Milkie D E, Davidson M W, Janetopoulos C, Wu X F S, Hammer J A, Liu Z, English B P, Mimori-Kiyosue Y, Romero D P, Ritter A T, Lippincott-Schwartz J, Fritz-Laylin L, Mullins R D, Mitchell D M, Bembenek J N, Reymann A C, Bohme R, Grill S W, Wang J T, Seydoux G, Tulu U S, Kiehart D P, Betzig E 2014 Science 346 439Google Scholar

    [25]

    Zhang W, Li S W, Yang Z G, Yu B, Lin D Y, Xiong J, Qu J L 2020 Biomed. Opt. Express 11 3648Google Scholar

  • 图 1  dLSFM系统光路示意图

    Fig. 1.  Schematic diagram of the dLSFM system.

    图 2  用于厚度和宽度标定的光片侧视图 (a) 通道I单边照明时的光片; (b) 双边照明时的光片; (c) 通道II单边照明时的光片

    Fig. 2.  Side view images of light sheet for thickness and width calibration: (a) Single-sided illumination with the path I; (b) dual-sided illumination; (c) single-sided illumination with path II.

    图 3  用于系统成像分辨率标定的直径100 nm荧光珠图像及其尺寸统计直方图 (a) 未经v-SPI处理的图像; (b) 图(a)中荧光珠沿X方向强度曲线FWHM的直方图分布(N = 25); (c) 经v-SPI处理的图像; (d) 图(c)中相同荧光珠沿X方向强度曲线FWHM的直方图分布; $ \overline{X} $为平均值

    Fig. 3.  Images of 100-nm-diameter fluorescent beads for system resolution calibration: (a) Image without v-SPI processing; (b) the corresponding histogram distribution of the intensity profile FWHM from 25 fluorescent beads in X direction; (c) image with v-SPI processing; (d) the corresponding FWHM histogram distribution from the same beads in X direction; $ \overline{X} $ is the average value.

    图 4  斑马鱼血管结构的大视场成像 (a) 通道I单边照明成像; (b) 双边照明成像; (c) 通道II单边照明成像

    Fig. 4.  Large FOV imaging of vascular structures in a zebrafish: (a) Single-sided illumination imaging with path I; (b) dual-sided illumination imaging; (c) single-sided illumination imaging with path II.

    图 5  斑马鱼运动神经元成像 (a) 未经特殊处理的图像; (b) RL解卷积处理的图像; (c) v-SPI处理图像; (d) 图(a)−(c)中黄色色实线标记位置的归一化强度曲线

    Fig. 5.  Images of motoneurons in a zebrafish: (a) Image without special processing; (b) image with RL deconvolution; (c) image with v-SPI processing; (d) normalized intensity profiles along the yellow solid lines in panels (a)−(c).

    图 6  斑马鱼运动神经元的三维成像 (a)−(c) 不同轴向位置拍摄的图像; (d), (e)三维重建效果图

    Fig. 6.  Three-dimensional imaging of motoneurons in a zebrafish: (a)−(c) Images from different axial positions; (d), (e) three-dimensional reconstruction renderings.

    Baidu
  • [1]

    Power R M, Huisken J 2017 Nat. Methods 14 360Google Scholar

    [2]

    Royer L A, Lemon W C, Chhetri R K, Wan Y N, Coleman M, Myers E W, Keller P J 2016 Nat. Biotechnol. 34 1267Google Scholar

    [3]

    Voie A H, Burns D H, Spelman F A 1993 J. Microsc-Oxford 170 229Google Scholar

    [4]

    Huisken J, Swoger J, Del Bene F, Wittbrodt J, Stelzer E H K 2004 Science 305 1007Google Scholar

    [5]

    Swoger J, Huisken J, Stelzer E H K 2003 Opt. Lett. 28 1654Google Scholar

    [6]

    Krzic U, Gunther S, Saunders T E, Streichan S J, Hufnagel L 2012 Nat. Methods 9 730Google Scholar

    [7]

    Keller P J, Schmidt A D, Wittbrodt J, Stelzer E H K 2008 Science 322 1065Google Scholar

    [8]

    Truong T V, Supatto W, Koos D S, Choi J M, Fraser S E 2011 Nat. Methods 8 757Google Scholar

    [9]

    Liu S, Nie J, Li Y S, Yu T T, Zhu D, Fei P 2017 J. Innovative Opt. Health. Sci. 10 1743006Google Scholar

    [10]

    Planchon T A, Gao L, Milkie D E, Davidson M W, Galbraith J A, Galbraith C G, Betzig E 2011 Nat. Methods 8 417Google Scholar

    [11]

    Gao L, Shao L, Chen B C, Betzig E 2014 Nat. Protoc. 9 1083Google Scholar

    [12]

    Vettenburg T, Dalgarno H I C, Nylk J, Coll-Lladό C, Ferrier D E K, Čižmár T, Gunn-Moore F J, Dholakia K 2014 Nat. Methods 11 541Google Scholar

    [13]

    Yang Z Y, Prokopas M, Nylk J, Coll-Lladό C, Gunn-Moore F J, Ferrier D E K, Vettenburg T, Dholakia K 2014 Biomed. Opt. Express 5 3434Google Scholar

    [14]

    Jia H, Yu X H, Yang Y L, Zhou X, Yan S H, Liu C, Lei M, Yao B L 2019 J. Biophotonics 12 e201800094Google Scholar

    [15]

    Gao L 2015 Opt. Express 23 6102Google Scholar

    [16]

    Westphal V, Rizzoli S O, Lauterbach M A, Kamin D, Jahn R, Hell S W 2008 Science 320 246Google Scholar

    [17]

    Li D, Shao L, Chen B C, Zhang X, Zhang M S, Moses B, Milkie D E, Beach J R, Hammer J A, Pasham M, Kirchhausen T, Baird M A, Davidson M W, Xu P Y, Betzig E 2015 Science 349 aab3500Google Scholar

    [18]

    Betzig E, Patterson G H, Sougrat R, Lindwasser O W, Olenych S, Bonifacino J S, Davidson M W, Lippincott-Schwartz J, Hess H F 2006 Science 313 1642Google Scholar

    [19]

    Rust M J, Bates M, Zhuang X W 2006 Nat. Methods 3 793Google Scholar

    [20]

    Dertinger T, Colyer R, Iyer G, Weiss S, Enderlein J 2009 Proc. Natl. Acad. Sci. U. S. A. 106 22287Google Scholar

    [21]

    Zanacchi F C, Lavagnino Z, Donnorso M P, Del Bue A, Furia L, Faretta M, Diaspro A 2011 Nat. Methods 8 1047Google Scholar

    [22]

    Liu Z, Lavis L D, Betzig E 2015 Mol. Cell 58 644Google Scholar

    [23]

    Legant W R, Shao L, Grimm J B, Brown T A, Milkie D E, Avants B B, Lavis L D, Betzig E 2016 Nat. Methods 13 359Google Scholar

    [24]

    Chen B C, Legant W R, Wang K, Shao L, Milkie D E, Davidson M W, Janetopoulos C, Wu X F S, Hammer J A, Liu Z, English B P, Mimori-Kiyosue Y, Romero D P, Ritter A T, Lippincott-Schwartz J, Fritz-Laylin L, Mullins R D, Mitchell D M, Bembenek J N, Reymann A C, Bohme R, Grill S W, Wang J T, Seydoux G, Tulu U S, Kiehart D P, Betzig E 2014 Science 346 439Google Scholar

    [25]

    Zhang W, Li S W, Yang Z G, Yu B, Lin D Y, Xiong J, Qu J L 2020 Biomed. Opt. Express 11 3648Google Scholar

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出版历程
  • 收稿日期:  2021-07-22
  • 修回日期:  2021-09-03
  • 上网日期:  2022-01-25
  • 刊出日期:  2022-01-20

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